Team

The Genomic Surveillance to Control Pathogen Infections in Africa consortium (GenPath Africa) connects African and European researchers from five organisations across five countries and two continents with a common goal: to increase the use of genomic epidemiology to address public health issues of importance in South Africa, Kenya and Mozambique.

The project brings together experts from multiple disciplines including epidemiologists, clinicians, bioinformaticians, immunologists, virologists, and public health and health policy specialists.

GenPath Africa is coordinated by Prof Tulio de Oliveira from Stellenbosch University (SU) and supported by LINQ management GmbH (LINQ).


Stellenbosch University - Centre for Epidemic Response and Innovation (CERI)

South Africa

Website

Tulio de Oliveira, PhD

Oversight & Coordination
Email

Cheryl Baxter, PhD

Project Manager
Email

Suzette Grobler


Grants and Contracts Officer
Email

Eduan Wilkinson, PhD

Bioinformatician
Email


Stellenbosch University - TB Genomics Research Group (TBGRG)

South Africa

Website

Rob Warren, PhD

Principal Investigator
Email

Nabila Ismail, PhD

Research Scientist
Email

Emilyn Costa Conceição, PhD

Post-Doctoral Research Fellow
Email

Felicia Wells

Laboratory Technician
Email


Stellenbosch University - Immunology Research Group (IRG)

South Africa

Website

Gerhard Walzl, PhD

Principal Investigator
Email

Stephanus Malherbe, PhD

Investigator
Email

Nelita du Plessis, PhD

Immunologist
Email


Stellenbosch University - Animal TB Research Group

South Africa

Website

Michele A. Miller, PhD

Principal Investigator
Email

Tanya Kerr, PhD

Research Study Coordinator
Email

Wynand Goosen, PhD

Principal Investigator
Email

Rachiel Gumbo, PhD

Post-Doctoral Fellow
Email

Rebecca Dwyer-Leonard, PhD

Research Assistant
Email


Stellenbosch University - South African Tuberculosis Bioinformatics Initiative (SATBBI)

South Africa

Website

Gerard Tromp, PhD

Bioinformatician
Email

Gian van der Spuy, PhD

Bioinformatician
Email

Elizna Maasdorp, PhD

Data Manager
Email


Stellenbosch University - Host-Pathogen Mycobactomics Research Group

South Africa

Website

Samantha Sampson, PhD

Principal Investigator
Email

Suné Dyers

Program Coordinator
Email


Stellenbosch University - Division of Medical Virology (DMV)

South Africa

Website

Wolfgang Preiser, PhD

Consultant Virologist
Email

Tongai Maponga, PhD

Senior Scientist & Researcher
Email


Instituto Nacional de Saúde (INS)

Mozambique

Website

Nalia Ismael

Co-Principal Investigator
Email

Eduardo Samo Gudo, PhD

Co-Principal Investigator
Email


International Livestock Research Institute (ILRI)

Kenya

Website

Samuel Oyola, PhD

Principal Investigator
Email

Gilbert Kibet

Bioinformatician
Email

Collins Muli

Biotechnologist
Email

Edward Okoth, PhD

Epidemiologist
Email

Benard Mware, PhD

Consultant Scientist
Email

John Juma, PhD

Bioinformatician
Email

Shebbar Osiany

Research Associate
Email

Paul Dobi

Biochemist
Email

Kennedy Mwangi

Research Associate
Email

Edward Kiritu

Associate Researcher
Email

Faith Kabaji

Project Manager
Email


University of Antwerp (UAntwerp)

Belgium

Website

Annelies Van Rie, PhD

Principal Investigator
Email

Miguel de Diego Fuertes

Research Assistant
Email

Miriam Ngarega

Epidemiologist
Email

Anzaan Dippenaar, PhD

Senior NGS Expert
Email

Vincent Rennie, PhD

Senior Bioinformatician
Email


LINQ Management GmbH (LINQ)

Germany

Website

Dr Claudia Schacht

Management Team Lead
Email

Hannah Faber

Communications Manager
Email

Dr Christoph Cyranski

Project Manager
Email